NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
1,010.5 |
| Mean read quality |
6.8 |
| Median read length |
159.0 |
| Median read quality |
7.7 |
| Number of reads |
677,728.0 |
| Read length N50 |
3,689.0 |
| STDEV read length |
4,860.3 |
| Total bases |
684,849,523.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q10 |
184037 (27.2%) 307.4Mb |
| >Q15 |
17310 (2.6%) 43.3Mb |
| >Q20 |
278 (0.0%) 0.6Mb |
| >Q25 |
26 (0.0%) 0.0Mb |
| >Q30 |
6 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
36.1 (405) |
| 2 |
34.3 (363) |
| 3 |
31.7 (158) |
| 4 |
31.0 (259) |
| 5 |
30.5 (346) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
1389408 (3.0) |
| 2 |
1126924 (4.0) |
| 3 |
877690 (3.2) |
| 4 |
757220 (4.8) |
| 5 |
643639 (2.8) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths