NanoPlot statistics report

NanoPlot reports

Summary statistics

General summary
Mean read length 4,825.4
Mean read quality 15.2
Median read length 2,763.0
Median read quality 15.8
Number of reads 117,479.0
Read length N50 9,034.0
STDEV read length 5,868.5
Total bases 566,883,659.0
Number, percentage and megabases of reads above quality cutoffs
>Q5 116765 (99.4%) 566.3Mb
>Q7 115827 (98.6%) 564.3Mb
>Q10 107675 (91.7%) 534.1Mb
>Q12 98744 (84.1%) 510.0Mb
>Q15 70667 (60.2%) 428.9Mb
Top 5 highest mean basecall quality scores and their read lengths
1 28.3 (2625)
2 27.0 (8407)
3 26.8 (14055)
4 25.4 (21109)
5 25.4 (6524)
Top 5 longest reads and their mean basecall quality score
1 101793 (5.5)
2 92194 (20.1)
3 80203 (15.6)
4 78340 (3.3)
5 75974 (18.5)

Plots

Weighted histogram of read lengths

Weighted histogram of read lengths after log transformation

Non weighted histogram of read lengths

Non weighted histogram of read lengths after log transformation

Yield by length