NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Active channels | 503.0 |
| Mean read length | 1,455.0 |
| Mean read quality | 10.6 |
| Median read length | 955.0 |
| Median read quality | 10.1 |
| Number of reads | 1,435,434.0 |
| Read length N50 | 2,173.0 |
| STDEV read length | 1,568.1 |
| Total bases | 2,088,574,589.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1435434 (100.0%) 2088.6Mb |
| >Q7 | 1435434 (100.0%) 2088.6Mb |
| >Q10 | 807628 (56.3%) 1147.1Mb |
| >Q12 | 169800 (11.8%) 198.1Mb |
| >Q15 | 28014 (2.0%) 40.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 47.6 (690) |
| 2 | 44.4 (1386) |
| 3 | 40.9 (1450) |
| 4 | 39.9 (702) |
| 5 | 37.8 (484) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 105494 (13.4) |
| 2 | 35696 (10.1) |
| 3 | 31161 (11.5) |
| 4 | 30854 (21.5) |
| 5 | 30773 (10.1) |