NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Active channels | 503.0 |
| Mean read length | 3,396.6 |
| Mean read quality | 10.2 |
| Median read length | 2,082.0 |
| Median read quality | 10.0 |
| Number of reads | 1,196,410.0 |
| Read length N50 | 5,846.0 |
| STDEV read length | 3,883.6 |
| Total bases | 4,063,677,562.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1196410 (100.0%) 4063.7Mb |
| >Q7 | 1196410 (100.0%) 4063.7Mb |
| >Q10 | 588471 (49.2%) 1957.7Mb |
| >Q12 | 62090 (5.2%) 156.2Mb |
| >Q15 | 5372 (0.4%) 17.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 90.0 (212) |
| 2 | 90.0 (251) |
| 3 | 90.0 (390) |
| 4 | 90.0 (446) |
| 5 | 90.0 (395) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 373939 (10.4) |
| 2 | 105764 (14.6) |
| 3 | 97300 (12.0) |
| 4 | 74810 (9.9) |
| 5 | 64505 (10.5) |