NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Active channels | 502.0 |
| Mean read length | 2,344.6 |
| Mean read quality | 10.7 |
| Median read length | 1,329.0 |
| Median read quality | 10.4 |
| Number of reads | 1,618,102.0 |
| Read length N50 | 4,325.0 |
| STDEV read length | 2,845.0 |
| Total bases | 3,793,871,703.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1618102 (100.0%) 3793.9Mb |
| >Q7 | 1618102 (100.0%) 3793.9Mb |
| >Q10 | 1045018 (64.6%) 2440.2Mb |
| >Q12 | 187538 (11.6%) 326.2Mb |
| >Q15 | 27646 (1.7%) 57.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 90.0 (2366) |
| 2 | 90.0 (199) |
| 3 | 90.0 (253) |
| 4 | 90.0 (189) |
| 5 | 90.0 (163) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 149075 (12.9) |
| 2 | 135583 (11.8) |
| 3 | 68327 (10.3) |
| 4 | 60099 (10.2) |
| 5 | 58432 (10.3) |