NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Active channels | 508.0 |
| Mean read length | 1,072.8 |
| Mean read quality | 12.1 |
| Median read length | 716.0 |
| Median read quality | 11.8 |
| Number of reads | 1,205,323.0 |
| Read length N50 | 1,558.0 |
| STDEV read length | 1,272.9 |
| Total bases | 1,293,024,147.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1205323 (100.0%) 1293.0Mb |
| >Q7 | 1205323 (100.0%) 1293.0Mb |
| >Q10 | 958852 (79.6%) 1045.2Mb |
| >Q12 | 566363 (47.0%) 665.2Mb |
| >Q15 | 133527 (11.1%) 197.7Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 90.0 (234) |
| 2 | 90.0 (662) |
| 3 | 90.0 (193) |
| 4 | 90.0 (537) |
| 5 | 90.0 (245) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 575146 (9.6) |
| 2 | 279700 (11.1) |
| 3 | 190160 (9.5) |
| 4 | 116982 (10.7) |
| 5 | 107991 (17.0) |